ABSTRACT
Introduction : Acute gastroenteritis is a typical disorder that accounts for 8-12% of pediatric outpatient visits. Campylobacter and Salmonella infections account for about 8.4% and 11% of global diarrhea cases. Due to the importance of these bacteria in pediatric diseases, the aim of this study was to determine the infectious rate of Salmonella and Campylobacter species and also the frequency of the gene encoding Cytholethal distending toxin in children with community-acquired diarrhea. Materials and Methods: Stool samples of children under 5 years of age with diarrhea were collected. The samples were related to children referred to hospitals in Hamadan, Ardabil, Bandar Abbas and two hospitals in Tehran. DNA was extracted from the samples using a DNA extraction kit from stool. The presence of Campylobacter in the studied samples was detected by polymerase chain reaction using specific primers. A control stool sample was spiked with 10-fold dilution of C. jejuni suspension for LOD (detection limit determination) measurement. Results: In this study, PCR results showed a LOD of 100 CFU per gram in the spiked feces sample. Accordingly, out of 144 fecal samples of children with acute diarrhea, one case was positive for Campylobacter jejuni;this sample was also positive for the presence of cdtB gene. Presence of Salmonella was confirmed in two samples of the patients (1.4%). Conclusion: Low prevalence of Campylobacter and Salmonella was detected in symptomatic children under 5 years of age during the Covid-19 pandemic. Examination of these samples for viruses and other microbial agents can clarify the etiology of diarrhea in children referred to the hospitals.
ABSTRACT
Background : In the 19th Week of 2020, Integrated Disease Surveillance Programme (IDSP) noted an unusual increase in the number of fever cases in Routine Syndromic Surveillance. Objectives : The unusual increase of fever cases were investigated to identify the agent, the source of infection and to propose recommendations for control measures. Methods : Active surveillance of fever cases done, blood samples, stool samples and water samples were collected from the affected area. The secondary data of indoor and outdoor patient were collected from the nearest health facilities. Result : It was a single peak outbreak of typhoid, started from 1st May, 2020, had peaked during the 19th Week of May. 2020 and ended on 31st May, 2020. The epicentre of the outbreak was the residential colony of Industrial labour. The outbreak of Typhoid occurred due to conditions generated due to the pandemic of COVID -19. Two sources of active infection were found. First, contaminated supply of drinking water and second a food-handler, who was the carrier of Typhoid. Interpretation and Conclusion : It is a lesson to learn that the local communicable diseases should be monitor during the pandemic. Otherwise, that can cause the situation of co-epidemic.
ABSTRACT
The outbreak of the novel coronavirus in China (2019-nCoV) has spread to all 31 provinces in China and more than 24 countries in the world. The cure criterion was based on the negative results with respiratory specimens in real-time reverse transcription polymerise chain reaction (RT-PCR) assays with an interval of 24 hrs. This report describes the controversial viral nucleic acid test in 27 cases after hospitalization for medical treatment for various periods. Of 27 cases, 6 cases showed positive results for fecal specimen, and 2 cases showed negative results with respiratory secretion but positive with fecal specimen. In summary, the consistence of results of nucleic acid test with different type of specimens from patients infected with 2019-nCoV varied, deeper research is needed to reveal the criteria of nucleic acid detection during different stages of the 2019-nCoV infection.
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Background: Although it was initially believed that the coronavirus disease 2019 (COVID-19) only attacked the respiratory system, reports over time demonstrated that this disease could attack the gastrointestinal tract (GIT) as well. The predominant presenting symptoms in patients infected with COVID-19 were gastrointestinal, resulting in gastrointestinal (GI) pathological changes. While clinicians' concerns are mostly related to respiratory system manifestations, GI symptoms should be monitored and managed appropriately. Objectives: This review summarizes the essential information about COVID-19 GIT infection in terms of pathogenesis, major pathological changes, microbiological bases of infection and the possibility of feco-oral transmission, the severity of associated symptoms, the major radiological findings, the impact on GI surgery, the role of therapeutic agents in induction or magnification of GI symptoms, and a pitfall on the nutritional supplementation in COVID-19 patients.
ABSTRACT
Campylobacteriosis is one of the most well-characterized bacterial foodborne infections worldwide, the species are the most common zoonotic pathogens. Chicken and chicken products are known to be the major sources of Campylobacter infection in humans. Campylobacter species represent one of the most common causes of bacterial diarrheal illness worldwide, it is the main cause of bacterial gastrointestinal infections occurring at any age, but it peaks in children and young adults. This study aims to investigate the presence and prevalence of Campylobacter bacteria in humans and chicken and aims for determination the extent of the contamination of this bacteria. The study involved two parts;the first part designed for isolation Campylobacter species from chickens which were alive, while the second part was about isolation Campylobacter species from human stool samples for different ages. The current study based on analysis of three hundred and fifty (350) stool samples taken from humans with different ages. The patients samples were collected from Al-Batool Teaching Hospital for Maternity and Pediatric, Baquba Teaching Hospital and Central Health Laboratories in Diyala, these patients were had vary clinical aspects like : (diarrhea, Fever, nausea, vomiting, abdominal pain and cramp, fatigue and muscle pain). On the other hand, one hundred seventy five (175) stool samples of chicken which they apparently had diarrhea were collected randomly from different areas of Diyala Governorate. The collection of both humans and chicken samples were during 2020 - 2021. The analysis of 350 samples of patients their ages ranged from 3 months to 59 years showed that the mean +or- SD of age was 24.5 +or- 14.3 years. The most predominant age group was 20-29 years (26.9%), while the lowest age group was 50-59 years (4.9%). Regarding the gender, 151 (43.1%) of the included patients were male and 199 (56.9%) were female. Patients included in the current study were collected from four districts of Diyala province. The highest collection rate was from Baquba district 217(62.0%), while the lowest collection rate was from Baladrooz district 18 (5.1%). the distribution of clinical signs and symptoms of included patients. Persistent diarrhea forming the predominance of signs 179 (51.1%), followed by watery diarrhea 55 (15.7%), while the least sign was vomiting 1(3%). Furthermore, 15 (4.3%) of patients showed all that signs and symptoms. The signs and symptoms were : diarrhea was found in 194 (55.4%) patients, followed by watery diarrhea in 77 (22.0%) patients. Fever was found in 30 (8.6%) patients. The least sign was nausea which was found in 15 (4.3%) patients. Abdominal pain and cramps were detected in 22 (6.3%) patients. Out of 350 stool specimens submitted for bacteriological culture, 62 (17.7%) were positive versus 288 (82.3%) were negative. Among the 62-culture positive, 13 specimens yield Campylobacter growth, so the campylobacter detection rate among human specimens was 3.7%. The isolated Campylobacter were as follow;11(3.1%) were Campylobacter jejuni, one (0.3%) was Campylobacter coli, one (0.3%) was undifferentiated campylobacter. On the other hand, 58 (16.6%) of the specimens yield bacterial growth other than Campylobacter, as follows: E. coli was detected in 28 (8.0%), Proteus Spp. was detected in 12 (3.4%), H. pylori was detected in 10 (2.9%) and Klebsiella Spp. was detected in 8 (2.3%). The remaining specimens 279 (79.7%) yield no growth. The results of the PCR technique revealed that 8 (2.38%) specimens were positive for Campylobacter, while the majority 335 (95.7%) were negative and 7(2.0%) of the specimens were not done. While the analysis of 175 chicken fecal samples taken from chickens were mainly suffering from diarrhea showed that the distribution of chickens according to their ages in days showed predominance was those 30-39 (40.6%) days old. It is clear that the majority of specimens (74.3%) were collected from Baquba districts. The results showed that specimens collected Al- Muqdadiya district farms had yielded the high
ABSTRACT
To investigate the status of viral infection in the feces of confirmed COVID-19, cases fecal samples or anal swabs from 36 confirmed cases were collected, 2019-nCoV was detected by real-time fluorescence RT-PCR, and the infection rates of the cases were compared by statistical analysis software SPSS 19.0. Among the 36 samples, 20 (55.56%) were positive for 2019-nCoV. The positive rate of critical cases (2/3) and severe cases(6/9) were both 66.67%, the positive rate of common pneumonia was 62.50% (10/16), and the positive rate of mild pneumonia was 25.00% (2/8). The 36 confirmed COVID-19 cases included 22 males and 14 females, with a detection rate of 54.55% and 57.14%, respectively. The age distribution range of the cases was ranging between 17 and 86 years old, with an average age of 48.75 years. Among the 36 samples, 2 positive specimens in 5 anal swab specimens and 18 positive specimens in 31 fecal specimens were detected. There were no statistically significant differences in the positive detection rates among clinical types, genders, ages and specimen types, respectively. From these results, we deduced that fecal samples of confirmed COVID-19 cases contained 2019-nCoV, which can cause infection through potential fecal-oral transmission and be significant for clinical treatment and epidemiological study.